Network from Scientific Research

The phylogenetic tree is based on the ORF1ab. The tree was constructed by the maximum likelihood method using appropriate models (GTR + I + G) based on iqtree. The viral species of each subgenus and their corresponding labels are present on the right of the phylogenetic tree. In addition, we have annotated the identified recombinant sequences, which were confirmed through RDP detection and manual corrections. These recombinant sequences have been marked with blue asterisks.

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