Workflow from Scientific Research

Open access visualization of Workflow, Flowchart, Cluster Search, Scoring Metrics, Abundance Estimation
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An example of the cluster search process. The values of the two scoring metrics (abund_i, frac_i) are shown beside each node v . The search results contain clusters 4 and 5 with estimated abundance 23.8 and 9, respectively. Nodes 6 and 3 did not pass the binomial test, thereby failing to traverse their descendants. The nodes in Path_4 and Path_5 are colored by blue and orange, respectively. K_4 shares the same orange k -mers with L_5 . Thus, we need to adjust C_4 based on cluster 5’s estimated abundance A_5 to calculate the accurate scoring metrics

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