Line Plot from Scientific Research

The sketch of the strain genome clustering process. Given the strain genomes (G1, G2, ...) of the bacteria of interest, all-against-all k -mers Jaccard similarities are computed using Dashing [ 40 ]. Genomes are then clustered using single-linkage hierarchical clustering. By default, the clustering threshold is set to a Jaccard similarity of 0.95. In this example, given the cutoff represented by the dashed red line, five clusters from C1 to C5 are output by the clustering process.

DOI