Line Plot from Scientific Research

Example of motif visualization for signature 17b using four types of logo plots. The frequency logo and the information logo are produced as in panel a. pLogo and kpLogo quantify the surprise of observing a letter given a binomial distribution, where kpLogo only shows the most surprising k-mer ( k <= 4) at each position. pLogo and kpLogo use as background the expected base distribution under a given signature, for signature 17b, the background is equivalent to the base distributions in panel a .

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