Chord from Scientific Research

Open access visualization of Chord, Line Plot, Bar Plot, Histogram, Circos representation
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Circos representation of P. giganteum genome features. The outermost layer of blocks is a circular representation of the 14 pseudo-chromosomes, with scale mark at each 10 Mb (I). Density of protein-coding genes (II), GC content (III), LTR/ Copia (IV), LTR/ Gypsy (V), and genome-wide heterozygous single-nucleotide polymorphisms (SNPs) (VI) computed using a 100-kb non-overlapping window. The innermost track shows inter-chromosomal synteny relationship, with colored links that represent syntenic blocks between the two subgenomes

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