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CRISPR spacer hits from arrays found in Pg are mapped onto Pg phages shown in midpoint-rooted tree at the top (30 full, 5 partial; b suffix indicates version of an a phage found in a different assembly of the Pg strain (based on whole genome nucleotide BLAST distance and scaled by VICTOR [ 28 ] d0 formula, recommended for nucleic acid datasets) dark blue cells indicate 0-mismatch spacer-phage nucleotide identity, light blue indicates 1-mismatch, and vignetting indicates presence of the entire prophage in the bacteria (as shown in Fig. 1 )

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