Sankey from Scientific Research

Overview of the HLCA core cell type composition for the first three levels of cell annotation, based on harmonized original labels. In the cell type hierarchy, the lowest level (1) consists of the coarsest possible annotations (that is, epithelial (48% of cells), immune (38%), endothelial (9%) and stromal (4%)). Higher levels (2-5) recursively break up coarser-level labels into finer ones ( Methods ). Cells were set to 'none' if no cell type label was available at the level. Cell labels making up less than 0.02% of all cells are not shown. Overall, 94, 66 and 7% of cells were annotated at levels 3, 4 and 5, respectively.

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