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A scheme of the GalNAc pathway identified in the associated SV region, which is divided into the initial cleavage from A-antigen (step 0) and five key steps of GalNAc utilization (steps 1–5; Supplementary Note 3 ). agaF + V + C + D genes encode four subunits of the GalNAc PTS system II complex protein. DHAP, dihydroxyacetone phosphate; FBP, fructose-1,6-bisphosphate; F6P, fructose 6-phosphate; GAP, glyceraldehyde 3-phosphate; PTS, phosphotransferase system; TBP, tagatose 1,6-bisphosphate. Created with BioRender.com .
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