Workflow from Scientific Research

Structure of the HDF5 container including dataset types and shapes. (Nx) refers to the number of methylation calls per chromosome x . R refers to the total number of reads in the entire container. Methylation calls are stored together with their genomic coordinate on the chromosome (range), the log-likelihood ratio (LLR) of methylation, and a numeric read ID (unique to this container). Read names are optionally stored, mapping each of the MetH5 numeric read IDs to the original read name. An arbitrary number of read groupings can be stored, assigning each read to exactly one read group per grouping.

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