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Recursive correlation clustering of per-patient log2FoldChange over time, in G-SAM bulk data. This includes the log2FoldChange of VST-transformed gene counts (C1 genes and cell-type marker genes), tumor purity, and the three NMF vectors representing the CL, MES, and PN subtypes. Correlated clusters are indicated in blue, anti-correlated clusters in red. Because log2FoldChanges are used as input, correlations represent correlated changes over time.
#Heatmap#Bubble Plot#G-SAM#Bulk Data#log2FoldChange#VST-transformed gene counts#C1 Genes#Cell-type marker genes#Tumor Purity#NMF vectors#CL Subtype#MES Subtype#PN Subtype
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