Bar Plot from Scientific Research

Number of genes that could be associated with at least one GO term, KEGG pathway or Reactome pathway by over-representation analysis. For PPs, the enrichment was performed on the differentially expressed proteins in each strain and for RPPs the KOs in which the respective protein was differentially expressed. For PS and PC, we considered the highest-scoring 1% of associations in the networks. Functional enrichment was considered significant for p < 0.01 (topology-weighted topGO analysis) or BH-adjusted p < 0.01 (KEGG/Reactome Fisher’s exact test,STAR Methods).

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