Scatter Plot from Scientific Research

PCA of 373 BMDMs and 1,123 proteins color coded by treatment condition. Diamond markers indicate bulk samples projected in the same low-dimensional space as the single cells. The adjoining PCA plots are color coded by the z -scored median relative abundance of proteins corresponding to type I IFN-mediated signaling and phagosome maturation. Performing this analysis without imputation recapitulates these results, as shown in Extended Data Fig. 7.

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