UMAP from Scientific Research

Two-species clustering of SDX single cells in P. trichocarpa and T. aralioides (B). Single-species unsupervised K-means clustering (i–iv). Two-species graph-based cell clustering using orthologous genes (v–vii). In (i), (iii), and (v), black dots are SDX cells from P. trichocarpa and gold dots are cells from T. aralioides. In (ii) and (iv), the colors of cell clusters for each species are based on their single-species cell clustering results. The cell clusters in two-species clustering (vi). In (vii), the colors of two-species clustering are derived from that of single-species clustering (see “Methods”).

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