UMAP from Scientific Research

Pseudotime ordering of Kupffer cells from livers of ChATfloxand ChATflox;Mb1-Cremice projected onto a UMAP embedding. Arrows indicate the direction of phenotypic changes. Data are largely consistent with the time point (cell color) at which the cells were isolated. Kupffer cells were sub-clustered from the scRNA-seq data inFigure 2. Pseudotime ordering was determined using Slingshot, and CellRank was used to compute global ordering.

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