Violin Plot from Scientific Research

Violin and box plot quantifying neoloops per megabase within cyclic, BFB, complex, linear amplifications identified by NeoLoopFinder ( n =number of unique amplifications). Loop counts are quantified for each focal amplification, normalized by the size of the focal amplification and classified as a neoloop if they span an SV breakpoint. P values were calculated using a two-sided Wilcoxon rank-sum test and adjusted using the BH procedure. Box centerline, median; box limits, upper and lower quartiles; box whiskers, 1.5 interquartile range. fSCNA, focal somatic CN amplifications.

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