Manhattan Plot from Scientific Research

Open access visualization of Manhattan Plot, Illustration, Quantitative Trait Locus, Azoxystrobin, Linkage Disequilibrium
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A region surrounding a quantitative trait locus (QTL) for relative rate of growth on azoxystrobin (top), with -log(P) on the y axis and position in Mb on the x . The colours of points represent linkage disequilibrium of variants at the different positions with the QTL (the purple point with associated P value). The red line is a P value of 0.01. Below this region, the two genes neighbouring the 48 bp InDel underlying the QTL are illustrated. These included a small gene with no known domains and a larger centrosomin-encoding gene

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