Heatmap from Scientific Research

Heatmap of differentially upregulated genes in JMML vs. normal control of the HSC cells using the FindMarkers function with the Wilcoxon rank sum test. Only cell surface and upregulated genes (FDR < 0.05) are shown. Genes associated with cell surface markers are labeled to the right. Hierarchical clustering of all HSC cells and their respective group assignment are labeled on top. Genes with TPM < 5 on at least 75% of all normal GTEx samples are further annotated to the right. Average Exp average expression, C_Monocytes classical monocytes, mDCs myeloid dendritic cells, N_Monocytes non-classical monocytes, ISG+ ISG expressing immune cells, MS/Mass Spec mass spectrometry, RNA scRNAseq.

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