Line Plot from Scientific Research

Median difference to simulated FMAT for unfiltered and intron-filtered data (shaded areas show interquartile ranges); negative values mean underestimation of simulated values. Intron filtering is described in the main text and improves results particularly for HISAT-3N in the low mappability segment. STAR shows larger underestimation with increasing conversion rates indicating difficulties to map spliced reads with more NCs.

DOI