Line Step from Scientific Research

Receiver operating characteristic (ROC) curves of SwitchFinder predictions of RNA switches from the common Rfam families. SwitchFinder was applied to a mix of real sequences and their shuffled counterparts (with preserved dinucleotide content). ROC curves measure its ability to correctly select the real sequences. AUC, area under the ROC curve; riboswitch families, c-di-GMP-I (Cyclic di-GMP); FMN, flavin mononucleotide; NiCo, nickel or cobalt ions; SAM, S-adenosyl-l-methionine; THF, tetrahydrofolate; TPP, thiamine pyrophosphate.

DOI