A prophage gene (second from the 5’ end) under positive selection. This prophage was carried by the genome of one Prevotella sp900317685 strain coexisting with other strains of this species in 46 of the 240 RUG2 samples. Inset figure panel (Upper right corner): distribution of host species that carry various numbers of prophages among the 240 RUG2 samples. See also Supplementary Table 2 for the comparison between the vOTUs taxonomic classification based on the old and new International Committee on Taxonomy of Viruses (ICTV) taxonomy and Supplementary Table 3 for the full list of ARG-carrying prophages and their annotations