Workflow from Scientific Research

The variant genotyping workflow of EVG mainly consists of three steps: (1) subsample sequencing reads, filter variants, and reformat the input variant VCF file; (2) select one or multiple suitable graph-based genotypers (shown as colored dots) and do genotyping with each of them in parallel; (3) merge the genotype results from step 2 and determine the final genotype for each variant.

DOI