UMAP from Scientific Research

UMAP visualization of mouse lung nuclei ( n = 73,280) integrating two replicates across two loading inputs. Nuclei are colored by their predicted cell type. Abbreviations: AM, alveolar macrophages; AT1, alveolar type 1 epithelial cells; AT2, alveolar type 2 epithelial cells; avlEC, arterial/venous/lymphatic endothelial cells; B/T sub, B and T cell subpopulation; cEC, capillary endothelial cells; Col13 + FB, collagen type XIII α 1 chain positive fibroblasts; Col14 + FB, collagen type XIV α 1 chain positive fibroblasts; DC/IM/cMono, dendritic cells/interstitial macrophages/classical monocytes; EC, endothelial cells; GB, germinal B cells; Hep, hepatocytes; HPC/Cho, hepatic progenitor cells/cholangiocytes; KC/Mono, Kupffer cells/monocytes; lsEC, liver sinusoidal endothelial cells; Lym, lymphocytes; Mes, mesothelial cells; MyoFB, myofibroblasts; ncMono, nonclassical monocytes; Peri, pericytes; SMC, smooth muscle cells, vEC, venous endothelial cells, vSMC, vascular smooth muscle cells.

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