Heatmap from Scientific Research

Top 20 striatal-astrocyte-enriched genes from RNA-seq 15 of 13 brain areas: OB, olfactory bulb; MCX, motor cortex; SCX, somatosensory cortex; VCX, visual cortex; HIP, hippocampus; STR, striatum; TH, thalamus; HY, hypothalamus; CB, cerebellum; MB, midbrain; HB, hindbrain; DSC, dorsal spinal cord; VSC, ventral spinal cord. The fragments per kilobase per million mapped fragments (FPKM) z -score shows the 20 striatal-astrocyte-enriched genes as compared with other areas and their enrichment (log 2 immunoprecipitated (IP)/input). The orphan gene 9330182L06RiK has been abbreviated as 93...RiK in a . The other heat maps show the genes plotted from bulk RNA-seq data from human OCD 5 and HD 6 and in astrocytes from individuals with HD 7 relative to control individuals.

DOI