Heatmap from Scientific Research

Min–max scaled mean expression of marker genes for KRT17 hi aberrant basal cells (defined by Jaeger et al. 40 ) in basal neighborhoods identified with the ACR design (left) and the CR design (right). Neighborhoods are ordered by increasing DA log fold change between IPF and control cells. The dots at the top indicate the log fold change (color) and spatial FDR (size) for the DA test. The boxes denote neighborhoods where the enrichment in IPF cells was significant (spatial FDR 1%).

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