Differential abundance analyses comparing samples from the growing or stable community states, in the bulk soil or the wheat rhizosphere, inoculated with P. protegens CHA0 with those uninoculated at the initial or final sampling times (dpi, days post inoculation). The wheat rhizosphere (Rhiz.) was not sampled at the initial sampling time (1 dpi) due to limited biomass. Dots represent ASVs, with sizes according to adjusted (adj.) p -value and coloured according to their phylum assignation. The numbers of differentially abundant ASVs are indicated above (left, more abundant in the inoculated condition; centre and grey, not significantly different between conditions; right, more abundant in the uninoculated condition). ASVs with a |log 2 FoldChange| > 2.5 and a adj. p -value < 0.01 were considered significant.
