Box Plot from Scientific Research

Comparing amino acid embedding strategies. ROC-AUC values of a single dense classification prediction using different encoding strategies, including one-hot encoding (OHE), amino acid descriptors (aaDescriptors) and embeddings from protein transformer-based PLMs on pathogenic peptides (i) and self-antigens (ii). Each point represents the ROC-AUC value from one round of 10-fold cross-validations.

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